FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007930755

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930755
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences440067
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11030.2506436519893562No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8860.20133297884185816No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7690.17474611820472793No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6390.14520516194124986No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6170.14020592318896896No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)