FastQCFastQC Report
Wed 31 May 2023
EGAF00007930767

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930767
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences409607
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12270.2995554275195492No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9810.2394978601439917No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9240.22558208233746008No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6680.16308315043444083No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6470.15795628492677127No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5300.12939231995546951No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5130.12524200025878462No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA4410.10766417566106048No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)