FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930775

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930775
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences398371
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9860.24750797623320975No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9670.2427385527560992No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6390.16040324220387528No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5790.14534190490773677No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5450.1368071471065916No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5390.13530101337697772No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT4760.1194866092160323No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)