FastQCFastQC Report
Sun 21 May 2023
EGAF00007930777

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930777
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences402010
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10310.2564612820576603No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10140.25223253152906644No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6410.15944876993109625No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5790.1440262680032835No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5770.14352876794109598No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5570.1385537673192209No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT4600.11442501430312679No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)