FastQCFastQC Report
Sun 21 May 2023
EGAF00007930781

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930781
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences447652
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT49281.100855128537346No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT17300.38646091160097573No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG14650.32726314190487255No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC13770.30760501460956274No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG13270.29643562410086405No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC12150.27141618936137896No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10750.2401418959370225No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC10500.23455720068267316No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG10290.2298660566690197No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC9450.2111014806144058No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC8180.18273122872231107No Hit
GAAGAGGCTCCGGCAGTTGATCCAGTGCAGG7850.17535943098656992No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7280.16262632580665337No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7100.15860534522352185No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT6870.15346742558952042No Hit
GTGAACGCAAAAATTGATCGCCTGAACCAGA6230.13917060573838605No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6070.13559640077560248No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6060.1353730129654285No Hit
GAACCGATCTACGCTACCATCGACGACCTGG5580.12465039807707773No Hit
ACTAGCCCGGAAGAACCGATCTACACCCAGG5400.12062941749394619No Hit
AGCCCGGCTAAATCTGCGCCGCCGTCTCCGG4850.1083430879343776No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG4830.10789631231402964No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC4570.10208822924950632No Hit

[OK]Adapter Content

Adapter graph