FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007930965

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930965
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24567322
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AATCTCTC670502927.29247005432664No Hit
GTCTCTCG641400326.10786393405028No Hit
CGGAGGGA633880325.801766264959607No Hit
TCAGAAAT475630319.360282736555494No Hit
GTCTCTCA466610.18993116140212596No Hit
CGGAGGAA339460.1381754185498932No Hit
AATCTCTA334940.13633557617716738No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)