FastQCFastQC Report
Wed 31 May 2023
EGAF00007930983

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930983
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32749756
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTTACC850893025.98165922213283No Hit
GCGCAGAA829920225.341263611246447No Hit
CGAACCTG777024023.726100432626122No Hit
TATGGTGT769364623.492223880996242No Hit
ATCTTACA612050.18688688856185678No Hit
CGAACCTA563310.17200433493306028No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)