FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007931007

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931007
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32634293
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTATCCG864641626.494877642975133No Hit
AAATGTGC818307025.0750644421805No Hit
CTCGCGTA784666124.044219373773473No Hit
GGGCAAAT755509823.150794166124573No Hit
TCTATCCA372520.11414986070021496No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)