FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007931013

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931013
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32572281
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTATCCG862536426.480687674283544No Hit
AAATGTGC816483025.06680450165587No Hit
CTCGCGTA783382424.050584605972176No Hit
GGGCAAAT754182823.154129119787466No Hit
TCTATCCA369540.1134522939919375No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)