FastQCFastQC Report
Wed 31 May 2023
EGAF00007931016

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931016
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32161359
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTATCCG851289526.46932612518022No Hit
AAATGTGC803972724.998094763346288No Hit
CTCGCGTA773586024.05327461442161No Hit
GGGCAAAT742945423.100559898603787No Hit
TCTATCCA367040.11412453062073652No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)