FastQCFastQC Report
Sun 21 May 2023
EGAF00007931256

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931256
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences354660
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG48041.354536739412395No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT23760.6699374048384368No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA18350.5173969435515705No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT18100.5103479388710314No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG10100.28477978909378No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA10050.2833699881576721No Hit
AAAAAACTGCCAGCAGGTGGTCGCCTGCCGG8220.23177127389612584No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA8130.2292336322111318No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7510.21175210060339478No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA6530.1841200022556815No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6190.17453335589014832No Hit
GCGGTGGCAGAAAAACTGCGTACCAAATGGG6020.16974003270738172No Hit
GAACCGATCTACGCTACCATCGACGACCTGG5440.15338634184853098No Hit
GGCGCCGCAGGCGATGGCGACGGTGGCGGTT5330.1502847797890938No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC4820.135904810240794No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT4690.13223932780691366No Hit
ATGGCACGTCGCCTGCCGAAACCGACTCTGC4370.1232166018158236No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC4300.12124288050527265No Hit
GTGAACGCAAAAATTGATCGCCTGAACCAGA4140.11673151750972763No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC3950.1113742739525179No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCT3800.10714487114419444No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC3740.10545311002086505No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC3650.10291546833587097No Hit

[OK]Adapter Content

Adapter graph