FastQCFastQC Report
Sun 21 May 2023
EGAF00007931261

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931261
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences430351
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT8130.18891555962458553No Hit
TGCACGTTCCGGAGACGGGTTACGGGTGCGTTTGTTAGACGGCG7360.17102318804882527No Hit
CGGATGAGTTTTCGGAGTCGGCCACGGCAGTTTACGCGGCTTCT6430.14941292108069923No Hit
AGGGTGGGTCTTCGGGGTCGGCCACGGCAGTTTACGCGGTTTTT6010.13965344567573912No Hit
ATCGCCCGGAACTACCTGGCTAGTGTGACCGGTCTCGGCAGCGG5680.13198528642898472No Hit
CATGGTGTCGCCCGGCACTACCTGGGAAGTGTGGCCGGTCTCAG4700.1092131771507444No Hit
GAAGATGTAATCCCAGGACTCATCCAGGTCAGCCGGATCGATAG4620.10735422945456151No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC4490.10433343944826433No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)