FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007931270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences507650
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG16170.3185265438786566No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC11320.2229882793263075No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10410.20506254309071212No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7740.15246725105880035No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7270.14320890377228407No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7170.14123904264749337No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)