FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007931274

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931274
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences519173
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10730.2066748463421634No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9450.18202025143834522No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6760.13020707933578982No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6650.12808832508624293No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5970.1149905715435895No Hit
ACCAGCGGTAATGTTAGCGTTGGTTATAACC5590.1076712386815185No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)