FastQCFastQC Report
Wed 31 May 2023
EGAF00007931284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences532224
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11080.2081830206830207No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9910.18619979557479557No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9750.18319354256854256No Hit
GAAATGGAGAACATCCTGCAGAACCTGACTC6470.12156535594035595No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)