FastQCFastQC Report
Sun 21 May 2023
EGAF00007931290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences518329
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42900.8276596524601171No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA39710.7661157295848775No Hit
ACCGATTGCGACCTGGATCCGATGGAAGGCA19940.3846977498847257No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT19820.3823826179897324No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT19280.3719645244622624No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA18380.35460103524981235No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA15880.30636912077078454No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC14790.2853400060579285No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC12160.23460003202599122No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA11490.22167387894561175No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC10520.202959896127749No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC9050.17459953041408063No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA7990.15414919867497284No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA7850.1514482114641473No Hit
ATGATGGACCCGAACTCTACCAGCGAAGACG6340.12231613511881449No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA6310.12173735214506616No Hit
TCTGGCTACGAAATTGACCACATCGACCTGG6160.11884343727632449No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG6150.1186505096184084No Hit
CCGAAGAAAAACCGTAAACCGAAGCCACCGA5780.11151218627551227No Hit
GTTCCGGAAGAAATCATCCCGGTTACCAAAC5450.1051455735642806No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCT5420.10456679059053227No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5330.10283044166928727No Hit

[OK]Adapter Content

Adapter graph