FastQCFastQC Report
Wed 31 May 2023
EGAF00007931316

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931316
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences478243
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40630.8495681065901645No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10670.22310833613874118No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10270.21474438726756065No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9190.19216172531537315No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6640.13884155126159714No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4940.10329476855907979No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA4800.1003673864541666No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)