FastQCFastQC Report
Wed 31 May 2023
EGAF00007931332

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931332
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences558715
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11050.19777525214107372No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10190.1823827890785105No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8390.15016600592430845No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG8030.14372264929346804No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7620.13638438201945535No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)