FastQCFastQC Report
Wed 31 May 2023
EGAF00007931460

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931460
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences561686
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12150.21631302898772625No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10830.19281235423350412No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG9640.1716261398717433No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7940.14136011935494208No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7130.12693925075576035No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA7020.1249808611929085No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6650.1183935508451341No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG6500.11572301962306342No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6490.1155449842082587No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)