FastQCFastQC Report
Wed 31 May 2023
EGAF00007931488

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931488
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences567003
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG52150.9197482200270545No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT20210.35643550386858625No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA7450.1313926028610078No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6930.12222157554721932No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5920.10440861864928404No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)