FastQCFastQC Report
Wed 31 May 2023
EGAF00007931500

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931500
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences557535
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT25480.4570116674289506No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14990.26886204453532064No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12140.21774417749558322No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG11320.2030365806630974No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10230.1834862385321101No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8790.1576582636067691No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7180.128781152752742No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7060.12662882150896357No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG6190.11102441999157003No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5740.10295317782740096No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)