FastQCFastQC Report
Sun 21 May 2023
EGAF00007931504

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931504
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences557568
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11670.20930182506887055No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6250.11209395087235996No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5910.10599603994490359No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5760.10330578512396695No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5590.10025682966023876No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5580.10007747933884296No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)