FastQCFastQC Report
Wed 8 May 2024
EGAF00007931506

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931506
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences502282
Total Bases15.5 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47030.9363266053730773No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT18990.37807446812746626No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6870.13677575545211654No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGA6620.1317984717748197No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6430.12801573618007414No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG6340.1262239140562473No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5180.10312931779359005No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5090.1013374956697632No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)