FastQCFastQC Report
Sun 21 May 2023
EGAF00007931508

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931508
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences523949
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT18910.3609129896230358No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10820.20650864874253028No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7280.1389448209653993No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6880.1313104901431246No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGA6330.12081328526249693No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG6140.11718697812191645No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5570.10630805670017501No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5430.10363604091237888No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)