FastQCFastQC Report
Sun 21 May 2023
EGAF00007931544

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931544
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences527421
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC26030.49353362873302353No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA16250.30810301447989363No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG14480.27454348613346835No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT13830.26221936555427255No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG13030.24705121714910858No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC12150.2303662539034282No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG11200.21235407767229594No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG10980.20818283686087585No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC10600.20097796636842297No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG9970.18903304949935631No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9920.18808504022403355No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9560.18125937344170975No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9040.17140007697835316No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7790.14769984509528442No Hit
GCCGATGGTAAAGAAGAAGAGATTAGCGTCC7680.14561422468957436No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC7200.13651333564647594No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC7180.13613413193634688No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7010.13291090040024953No Hit
CTGGCACAGTACGATGAAGACGGCAACGGCT6810.12911886329895852No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG6680.12665403918311935No Hit
TCCCCGCCTCGTCGCCCGCCGCCGGGTCGTC5570.10560823327095431No Hit

[OK]Adapter Content

Adapter graph