FastQCFastQC Report
Sun 21 May 2023
EGAF00007931550

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931550
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences497477
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12030.2418202248546164No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9710.19518490302064218No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7880.15839928278091248No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7580.1523688532334158No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC6560.13186539277192713No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6370.12804612072517926No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5960.1198045336769338No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC5830.11719134753968524No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC5550.11156294662868836No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC5260.1057335313994416No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)