FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007931600

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931600
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences493888
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45110.9133649734352729No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT31940.6467053259038487No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12360.2502591680704937No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG11940.24175521575741868No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8920.18060774912530775No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT6790.13748056239471296No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6620.1340384864584683No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)