FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007931612

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931612
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences476748
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA13100.27477828957856143No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11520.24163709129351357No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10460.21940312282379787No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5860.12291608984201297No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5760.12081854564675679No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5140.10781377163616838No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5090.10676499953854027No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4890.1025699111480279No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)