FastQCFastQC Report
Sun 21 May 2023
EGAF00007931640

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931640
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences456067
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG39460.8652237500191858No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA18880.4139742625535283No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7370.16159906329552456No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7060.15480181639978338No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6260.1372605340881932No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)