FastQCFastQC Report
Sun 21 May 2023
EGAF00007931658

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931658
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences521983
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT27290.5228139613742211No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC20480.39234994243107535No Hit
CTGGAACGTCCGGTGTACCCGAAACCGGTTC16170.30978020356984803No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14040.2689742769400536No Hit
ATCCAGGGCAAACTGGAATACCGTCACACCT13950.26725008285710455No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA13950.26725008285710455No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT12650.24234505721450697No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG12380.2371724749656598No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10240.19617497121553767No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG9210.1764425278217873No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA8960.17165309981359547No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG8720.1670552489257313No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC8710.16686367180540362No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG8620.16513947772245458No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7970.15268696490115577No Hit
TCCTACACCAACGGCAAACTGACTATCACCC5990.11475469507627642No Hit
ATGATGGACCCGAACTCTACCAGCGAAGACG5980.11456311795594876No Hit
CGTCAGCGTGACGCAGAAAACCGTAGCCAGG5540.10613372466153112No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC5540.10613372466153112No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA5430.10402637633792672No Hit
CCTCGTCGTCCGCCGCCAGGCCGTCGCCCGT5280.10115271953301161No Hit

[OK]Adapter Content

Adapter graph