FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007931660

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931660
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences497763
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42000.8437750495717841No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT27040.5432304128671678No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC19140.38452034401914165No Hit
CTGGAACGTCCGGTGTACCCGAAACCGGTTC14820.29773205320604385No Hit
ATCCAGGGCAAACTGGAATACCGTCACACCT14110.28346823689185413No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA12550.25212802076490215No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT11900.23906959737867217No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG11530.23163634098958744No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9390.18864399322569175No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA8560.17196939105558268No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG8360.1679514146290504No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC8290.16654512287976406No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG7780.1562992829921067No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7720.155093890064147No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7260.1458525442831227No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC5640.11330693522821102No Hit
ATGATGGACCCGAACTCTACCAGCGAAGACG5620.11290513758555779No Hit
TCCTACACCAACGGCAAACTGACTATCACCC5440.1092889588016787No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA5300.1064763753031061No Hit
CGTCAGCGTGACGCAGAAAACCGTAGCCAGG5240.10527098237514641No Hit
CCTCGTCGTCCGCCGCCAGGCCGTCGCCCGT5090.10225750005524717No Hit

[OK]Adapter Content

Adapter graph