FastQCFastQC Report
Wed 31 May 2023
EGAF00007931662

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931662
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences418985
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT47261.1279640082580522No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT26620.6353449407496689No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11840.28258768213659197No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG10250.2446388295523706No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA8960.21385013783309664No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8610.20549661682399128No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8320.19857512798787547No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7860.18759621466162274No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG6750.16110361946131724No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6470.15442080265403296No Hit
TACCAGGTTGGCATCGACGGCTCTAACCTGG6280.14988603410623294No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG6250.1491700180197382No Hit
GCTTCCGAACCGGAGGACAAATCTCCGCGCG5960.14224852918362232No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCT5770.13771376063582227No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA5740.13699774454932753No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG5270.12578015919424324No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG5190.1238707829635906No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG4910.1171879661563063No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG4890.11671062209864314No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA4840.11551726195448524No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC4740.11313054166616943No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC4650.1109824934066852No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAAC4230.1009582681957588No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)