FastQCFastQC Report
Sun 21 May 2023
EGAF00007931684

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931684
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences458211
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21080.46005006427170014No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG16010.3494023495725768No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT10770.23504455370997202No Hit
ACCGAACCTACTACTGATTACGGCGGTGACTCC10340.22566023076704836No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG9590.20929222563404196No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC8630.18834117906379375No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT7600.16586245201446495No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC7330.15996997016658263No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC6490.14163780441761548No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGCTG6140.13399940202221247No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCGGT4710.10279107223528025No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)