FastQCFastQC Report
Sun 21 May 2023
EGAF00007931692

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931692
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences463143
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG49811.0754777682055003No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT20280.43787771811298026No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC13760.29710046357172626No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC8330.17985805679887207No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCATT7710.16647126265537857No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT7670.16560759851708867No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCCGT6820.14725473557842825No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTGGC6590.14228866678326132No Hit
CATTCTAACGATCAGCACGCGGGTGATCACATC6500.14034542247210904No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT6280.1355952697115146No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5120.11054900970110743No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)