FastQCFastQC Report
Wed 31 May 2023
EGAF00007931702

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931702
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences478660
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG30420.6355241716458446No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23400.48886474741988045No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT15990.334057577403585No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC6620.13830276187690635No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6500.13579576317218903No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCATT6120.12785693394058414No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG6030.12597668491204614No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC5220.10905444365520411No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)