FastQCFastQC Report
Wed 31 May 2023
EGAF00007931712

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931712
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences486821
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG10350.21260381125711506No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT9220.18939199418266672No Hit
ACCACTCCGACGAAAAGCCACTTCGCAAACCTG7520.1544715614157976No Hit
TCCTCCAACAGCCCGCACGTGGTTAAAACCGCA7400.15200658969107742No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG7130.14646040331045704No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6980.14337918865455682No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG6000.12324858623600872No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5830.11975654295932181No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC5730.11770239985538831No Hit
ACCCAGGGCGAAGTAAACGTGACGGGTGTTATC5710.11729157123460163No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT5700.11708615692420828No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCGAA5170.10619919847336085No Hit
CCGACCAAGTCTCACTTCGCCAACCTGAAGGGT5030.10332339812785397No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC4990.10250174088628058No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)