FastQCFastQC Report
Sun 21 May 2023
EGAF00007931718

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931718
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences501077
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCGAA12520.2498617976877805No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG12360.24666867567260123No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCGCG9520.18999075990316858No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTGGC9330.18619892751014316No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGGTG8650.1726281589456311No Hit
TTCACTCCGATCAAGAAACCGGGTACCTCCGGC7630.15227200609886304No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5600.11175927053127563No Hit
ACCCTGTCCCTGTCTCAGCTGTACTCCCACATT5020.10018420322625067No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)