FastQCFastQC Report
Sun 21 May 2023
EGAF00007931743

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931743
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences465656
Sequences flagged as poor quality0
Sequence length41
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGG10300.22119332726304397No Hit
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGAT9700.2083082790729637No Hit
CATATCCGGTTCACCGTCCGGGCCACCTTCCTGGTGATATT7500.16106310237600288No Hit
TTCCTGGTGATATTCAAAGTAGTCTGCTTCACCGACCGGGT6780.14560104454790662No Hit
GGTGGATGGGCCTTCACCAGGATCGTCAGCCGGGCCCTGCT6540.14044702527187453No Hit
GCCCTGACCGCGCGGGCCGGTGGACGGACCCTCACCCGGGT6070.13035373752297835No Hit
CGGTTCGCCGTCCGGGCCACCTTCCTGGTGATATTCAAAGT5920.12713247547545828No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGT5800.12455546583744223No Hit
TTCCTGGTGGTATTCGAAATAGTCTGCTTCGCCGACCGGGT4840.10393938873331386No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)