FastQCFastQC Report
Wed 31 May 2023
EGAF00007931744

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931744
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences465656
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22010.47266651777277646No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT14250.3060198945144055No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG9700.2083082790729637No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC7810.167720377274211No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCGAA7450.15998934836016285No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCGGT7140.15333207346195474No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC7000.15032556221760268No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTCGC6010.1290652327039703No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC5560.11940144656141015No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCGGT4930.1058721459618259No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)