FastQCFastQC Report
Sun 21 May 2023
EGAF00007931746

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931746
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences455050
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21990.4832435996044391No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG11660.2562355785078563No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT8730.19184704977475003No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAGCC5130.1127348643006263No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)