FastQCFastQC Report
Wed 31 May 2023
EGAF00007931748

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931748
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences463325
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG10030.21647871364592888No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6780.14633356715048831No Hit
GAAAACGTACTGATCGAGCTGAGCGATTCCTCT6750.14568607349053042No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5610.12108131441212971No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)