FastQCFastQC Report
Wed 31 May 2023
EGAF00007931756

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931756
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences477886
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG17820.3728922797487267No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT8700.182051786409311No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG6950.14543217420054155No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6550.1370619771242514No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGATG6190.12952879975559026No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5720.11969381819094932No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCGAA5090.1065107577957923No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)