FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007931764

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931764
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences513065
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG74021.4427021917300926No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA12830.2500657811388421No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12580.2451931041875786No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7550.14715484392815725No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5290.10310584428873534No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)