FastQCFastQC Report
Sun 21 May 2023
EGAF00007931792

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931792
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences475998
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG69381.4575691494502079No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13090.2750011554670398No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7590.159454451489292No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6650.13970646935491327No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5800.12184925146744313No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)