FastQCFastQC Report
Sun 21 May 2023
EGAF00007931794

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931794
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences575238
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT48740.8473014647850108No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG29350.5102235944078799No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC23760.41304642600106395No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT18320.3184768739200122No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA15060.26180467910673494No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA14360.24963580291983492No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT12560.2183444070106634No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA11060.19226824375302048No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG10700.18600996457118618No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC9790.17019042552821614No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG6280.1091722035053317No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6120.10639074609118312No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)