FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007931796

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931796
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences559802
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG79721.4240749407826339No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT47370.8461920464735746No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC23580.4212203600558769No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT17390.31064554967649277No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA14060.25116023165333456No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA13800.24651573234822313No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT12410.22168552452474266No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA11330.20239298894966432No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG10110.18059956913337216No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC9770.17452599311899564No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5950.10628758025158895No Hit
GGTGACGTTGCTAAAGCGATCAATGACGCGG5700.10182171553513564No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)