FastQCFastQC Report
Sun 21 May 2023
EGAF00007931822

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931822
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences454593
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG29680.6528917075273927No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT23250.511446502695818No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG8520.18742039582659653No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA7960.17510168436381554No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7690.16916230562283185No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC6930.15244405435191477No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6430.14144520483157463No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC5700.12538688453187796No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC5470.12032741375252148No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5070.11152833413624935No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC5050.11108838015543573No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC4850.10668884034729968No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)