FastQCFastQC Report
Sun 21 May 2023
EGAF00007931828

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931828
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences368766
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG55091.4939012815715116No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT41661.1297136937787107No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC11460.3107661769252046No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9860.2673782290124361No Hit
GAAGTCTCCATTGCCGAACCGACCACTTACA7010.19009344679281712No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6640.1800599838379894No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5130.1391126079953141No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5040.13667203592522087No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4470.12121507948129707No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4280.11606276066665581No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC3700.10033462954827724No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)