FastQCFastQC Report
Wed 31 May 2023
EGAF00007931832

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931832
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences418935
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG25670.6127442204637951No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT19910.4752527241696206No Hit
ATGTCCAACATGGACATCGATGGTATTAACA10570.25230644372038624No Hit
ACCGCATCCGGTGAAGAAGTTGCGGTACTGA8600.20528244238366333No Hit
ACCGCGTCCGGTGAAGAAGTAGCAGTTCTGA7510.179264086314106No Hit
CGTCGTGAACACGGTGGCCACGACGATGATC6910.1649420554501295No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6870.16398725339253106No Hit
ACCGCATCCGGTGAAGAAGTAGCTGTTCTGT6480.15467793333094632No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG6240.14894912098535573No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5070.12102116080060152No Hit
GCCGTCCGTTATTTCCGCGGCCGCGGCTCCG4910.11720195257020778No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)