FastQCFastQC Report
Wed 31 May 2023
EGAF00007931836

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931836
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences521661
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT41410.7938105397950009No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT39710.7612223263767083No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT39030.7481870410093912No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT37800.7246085101243911No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG28720.5505491113960983No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT27910.535021786179147No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC27410.525437017526708No Hit
GGTCGTCAGGGCTCCGACGTCGAGCTGGAAA25370.48633116142475674No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG21830.4184709993654883No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG21470.4115699659357322No Hit
TCCCGCGTTCCGGCTAAAAAACCGCGTAAAC18680.3580869568551224No Hit
CTGGAACGTCCGGTGTACCCGAAACCGGTTC18190.3486938835757321No Hit
TCTCGCGTGCCGGCGAAGAAACCGCGTAAAC17600.33738385656585407No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC14650.28083372151646374No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC14060.2695236945065857No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA13080.2507375479478052No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA11080.212398473338049No Hit
ATGGAGCCAGTTCAGCAGCGCCCGGTTATGT10680.20473065841609783No Hit
GCAGAAGCGCAGTCCACTCCGGAGCGTCCTG10530.20185522782036608No Hit
GAGAAAACGAAACAGACTCTGGCTTCTGTTT10090.19342063140621973No Hit
GACAAAGCTGAAGCACAGTCCACTCCGGAAC8540.16370784858365875No Hit
ATGATGGACCCGAACTCTACCAGCGAAGACG7650.14664696038231725No Hit
GGTGACGTTGCTAAAGCGATCAATGACGCGG7210.13821236396817088No Hit
ATGGAACCTGTGCAGCAGCGCCCGGTAATGT7180.13763727784902458No Hit
AACGGTGACATGGCTACCGGCTGGGTGAAGG7010.13437845650719527No Hit
ATGGAACCGGTCCAGCAGCGTCCGGTTATGT6750.12939437680792698No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA6520.12498538322780503No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCT5340.10236532920804892No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)